PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Traes_7AL_AC56CC184.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family WRKY
Protein Properties Length: 91aa    MW: 10217.6 Da    PI: 9.5741
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Traes_7AL_AC56CC184.1genomeIWGSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY66.73.5e-215091141
                           ---SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE- CS
                   WRKY  1 ldDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkvers 41
                           ++Dgy+WrKYGqK+ k++++pr+Y+rC++a +C+vkkkv+rs
  Traes_7AL_AC56CC184.1 50 VKDGYQWRKYGQKVTKDNPCPRAYFRCSFApSCQVKKKVQRS 91
                           58***************************99*********97 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5081118.6474591IPR003657WRKY domain
SuperFamilySSF1182907.59E-184991IPR003657WRKY domain
Gene3DG3DSA:2.20.25.802.9E-194991IPR003657WRKY domain
SMARTSM007748.2E-145091IPR003657WRKY domain
PfamPF031065.5E-175191IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 91 aa     Download sequence    Send to blast
VSVTVGPDQA ECTSVQEPCN SKRVHADEVK ASRVSKLYVH ADPSDLSLVV KDGYQWRKYG  60
QKVTKDNPCP RAYFRCSFAP SCQVKKKVQR S
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-133591154WRKY transcription factor 1
Search in ModeBase
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKR8273991e-146KR827399.1 Triticum aestivum WRKY48 transcriptional factor mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqNP_001146039.19e-40uncharacterized protein LOC100279570
SwissprotQ9C5T42e-29WRK18_ARATH; WRKY transcription factor 18
TrEMBLA0A0M4CD869e-62A0A0M4CD86_WHEAT; WRKY48 transcriptional factor
STRINGMLOC_70190.14e-54(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP182238103
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31800.21e-30WRKY DNA-binding protein 18
Publications ? help Back to Top
  1. Wang X, et al.
    Expression of TaWRKY44, a wheat WRKY gene, in transgenic tobacco confers multiple abiotic stress tolerances.
    Front Plant Sci, 2015. 6: p. 615
    [PMID:26322057]